About PrFEcT

The PrFEcT website is being developed as an online, open-access protein function and verification database archiving high- and low-throughput data and associated bioinformatics analyses for targeted bacterial proteins.

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E. coli Proteins - a database of 3d structure models of E. coli proteins with corresponding quality assessment and protein function prediction according to PFP and ESG.

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GenoBase - a major resource of high-throughput data for the E. coli K-12 model cell and public repository for sequence information, proteome, transcription, and metabolome data.

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GenExpDB - a searchable compendium of E. coli gene expression data, which has been manually curated and normalized to allow data-mining across the database.

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RegulonDB - the primary reference database with curated knowledge of the transcriptional regulatory network of E. coli K-12

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Orthology - a database of Classes of Reciprocal Sequence Homologues (CRSHs) of homologous microbial proteins likely to have equivalent biochemical functions

User Data Workspaces

Provides users with a system to upload different kinds of experimental into databases for storage, sharing, and analysis.

Status of Protein Targets

Shows proteins under investigation and the status of experimental approaches.

Transcription Factor Finder

Estimates the probability of involvement of all known E. coli transcription factors (TFs) in producing changes observed in mRNA profiling experiments

What is Multi-Site Search? PrFEcT Multi-Site Search

Simultaneously search multiple databases and websites. Results from each site will appear in a tabbed window.

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How does Multi-Site Search differ from Websearch?
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